cpu: Physical register structural + flat indexing

Mimic the changes done on the architectural register indexes on the
physical register indexes. This is specific to the O3 model. The
structure, called PhysRegId, contains a register class, a register
index and a flat register index. The flat register index is kept
because it is useful in some cases where the type of register is not
important (dependency graph and scoreboard for example). Instead
of directly using the structure, most of the code is working with
a const PhysRegId* (typedef to PhysRegIdPtr). The actual PhysRegId
objects are stored in the regFile.

Change-Id: Ic879a3cc608aa2f34e2168280faac1846de77667
Reviewed-by: Andreas Sandberg <andreas.sandberg@arm.com>
Reviewed-on: https://gem5-review.googlesource.com/2701
Reviewed-by: Anthony Gutierrez <anthony.gutierrez@amd.com>
Maintainer: Andreas Sandberg <andreas.sandberg@arm.com>

style: [patch 1/22] use /r/3648/ to reorganize includes

cpu/o3: clean up scoreboard object

It had a bunch of fields (and associated constructor
parameters) thet it didn't really use, and the array
initialization was needlessly verbose.

Also just hardwired the getReg() method to aleays
return true for misc regs, rather than having an array
of bits that we always kept marked as ready.

trace: reimplement the DTRACE function so it doesn't use a vector
At the same time, rename the trace flags to debug flags since they
have broader usage than simply tracing. This means that
--trace-flags is now --debug-flags and --trace-help is now --debug-help

Alpha: Fix Alpha NumMiscArchRegs constant.

Also add asserts in O3's Scoreboard class to catch bad indexes.

arch: nuke arch/isa_specific.hh and move stuff to generated config/the_isa.hh

Make the floating point zero register special handling only apply for ALPHA.

Update copyright.

Fixes to get compiling to work. This is mainly fixing up some includes; changing functions within the XCs; changing MemReqPtrs to Requests or Packets where appropriate.

Currently the O3 and Ozone CPUs do not work in the new memory system; I still need to fix up the ports to work and handle responses properly. This check-in is so that the merge between m5 and newmem is no longer outstanding.

src/SConscript:
Need to include FU Pool for new CPU model. I'll try to figure out a cleaner way to handle this in the future.
src/base/traceflags.py:
Include new traces flags, fix up merge mess up.
src/cpu/SConscript:
Include the base_dyn_inst.cc as one of othe sources.
Don't compile the Ozone CPU for now.
src/cpu/base.cc:
Remove an extra } from the merge.
src/cpu/base_dyn_inst.cc:
Fixes to make compiling work. Don't instantiate the OzoneCPU for now.
src/cpu/base_dyn_inst.hh:
src/cpu/o3/2bit_local_pred.cc:
src/cpu/o3/alpha_cpu_builder.cc:
src/cpu/o3/alpha_cpu_impl.hh:
src/cpu/o3/alpha_dyn_inst.hh:
src/cpu/o3/alpha_params.hh:
src/cpu/o3/bpred_unit.cc:
src/cpu/o3/btb.hh:
src/cpu/o3/commit.hh:
src/cpu/o3/commit_impl.hh:
src/cpu/o3/cpu.cc:
src/cpu/o3/cpu.hh:
src/cpu/o3/fetch.hh:
src/cpu/o3/fetch_impl.hh:
src/cpu/o3/free_list.hh:
src/cpu/o3/iew.hh:
src/cpu/o3/iew_impl.hh:
src/cpu/o3/inst_queue.hh:
src/cpu/o3/inst_queue_impl.hh:
src/cpu/o3/regfile.hh:
src/cpu/o3/sat_counter.hh:
src/cpu/op_class.hh:
src/cpu/ozone/cpu.hh:
src/cpu/checker/cpu.cc:
src/cpu/checker/cpu.hh:
src/cpu/checker/exec_context.hh:
src/cpu/checker/o3_cpu_builder.cc:
src/cpu/ozone/cpu_impl.hh:
src/mem/request.hh:
src/cpu/o3/fu_pool.hh:
src/cpu/o3/lsq.hh:
src/cpu/o3/lsq_unit.hh:
src/cpu/o3/lsq_unit_impl.hh:
src/cpu/o3/thread_state.hh:
src/cpu/ozone/back_end.hh:
src/cpu/ozone/dyn_inst.cc:
src/cpu/ozone/dyn_inst.hh:
src/cpu/ozone/front_end.hh:
src/cpu/ozone/inorder_back_end.hh:
src/cpu/ozone/lw_back_end.hh:
src/cpu/ozone/lw_lsq.hh:
src/cpu/ozone/ozone_impl.hh:
src/cpu/ozone/thread_state.hh:
Fixes to get compiling to work.
src/cpu/o3/alpha_cpu.hh:
Fixes to get compiling to work.
Float reg accessors have changed, as well as MemReqPtrs to RequestPtrs.
src/cpu/o3/alpha_dyn_inst_impl.hh:
Fixes to get compiling to work.
Pass in the packet to the completeAcc function.
Fix up syscall function.