mem: write combining for ruby protocols

This patch adds support for write-combining in ruby.

mem: misc flags for AMD gpu model

This patch add support to mark memory requests/packets with attributes defined
in HSA, such as memory order and scope.

ruby: reverts to changeset: bf82f1f7b040

ruby: DataBlock: adds a comment

mem: Add const getters for write packet data

This patch takes a first step in tightening up how we use the data
pointer in write packets. A const getter is added for the pointer
itself (getConstPtr), and a number of member functions are also made
const accordingly. In a range of places throughout the memory system
the new member is used.

The patch also removes the unused isReadWrite function.

Ruby: Use uint8_t instead of uint8 everywhere

Ruby: Correct DataBlock =operator
The =operator for the DataBlock class was incorrectly interpreting the class
member m_alloc. This variable stands for whether the assigned memory for the
data block needs to be freed or not by the class itself. It seems that the
=operator interpreted the variable as whether the memory is assigned to the
data block. This wrong interpretation was causing values not to propagate
to RubySystem::m_mem_vec_ptr. This caused major issues with restoring from
checkpoints when using a protocol which verified that the cache data was
consistent with the backing store (i.e. MOESI-hammer).

Ruby: Remove some unused typedefs
This patch removes some of the unused typedefs. It also moves
some of the typedefs from Global.hh to TypeDefines.hh. The patch
also eliminates the file NodeID.hh.

Ruby: Make DataBlock.hh independent of RubySystem
This patch changes DataBlock.hh so that it is not dependent on RubySystem.
This dependence seems unecessary. All those functions that depende on
RubySystem have been moved to DataBlock.cc file.

ruby: get rid of Vector and use STL
add a couple of helper functions to base for deleteing all pointers in
a container and outputting containers to a stream

ruby: style pass

ruby: get rid of std-includes.hh
Do not use "using namespace std;" in headers
Include header files as needed

ruby: fixed data block assignment fix

Fixed data block assignment to not delete if not internally allocated.

ruby: Ruby destruction fix.

Object print bug fix

merge

ruby: better debug print for DataBlock

1. Got rid of unused functions in DirectoryMemory
2. Reintroduced RMW_Read and RMW_Write
3. Defined -2 in the Sequencer as well as made a note about mandatory queue

Did not address the issues in the slicc because remaking the atomics altogether to allow
multiple processors to issue atomic requests at once

Minor fixes for compiling

Reintegrated Derek's functional implementation of atomics with a minor change: don't clear lock on failure

ruby: Import the latest ruby changes from gems.
This was done with an automated process, so there could be things that were
done in this tree in the past that didn't make it. One known regression
is that atomic memory operations do not seem to work properly anymore.

ruby: Make ruby #includes use full paths to the files they're including.
This basically means changing all #include statements and changing
autogenerated code so that it generates the correct paths. Because
slicc generates #includes, I had to hard code the include paths to
mem/protocol.

ruby: Import ruby and slicc from GEMS

We eventually plan to replace the m5 cache hierarchy with the GEMS
hierarchy, but for now we will make both live alongside eachother.