mem: Move ruby protocols into a directory called ruby_protocol.

Now that the gem5 protocols are split out, it would be nice to put them
in their own protocol directory. It's also confusing to have files
called *_protocol which are not in the protocol directory.

Change-Id: I7475ee111630050a2421816dfd290921baab9f71
Reviewed-on: https://gem5-review.googlesource.com/c/public/gem5/+/20230
Reviewed-by: Gabe Black <gabeblack@google.com>
Reviewed-by: Andreas Sandberg <andreas.sandberg@arm.com>
Reviewed-by: Jason Lowe-Power <jason@lowepower.com>
Maintainer: Gabe Black <gabeblack@google.com>
Tested-by: kokoro <noreply+kokoro@google.com>

style: remove trailing whitespace

Result of running 'hg m5style --skip-all --fix-white -a'.

ruby: modify the directed tester to read/write streams
The directed tester supports only generating only read or only write accesses. The
patch modifies the tester to support streams that have both read and write accesses.

MAC: Make gem5 compile and run on MacOSX 10.7.2

Adaptations to make gem5 compile and run on OSX 10.7.2, with a stock
gcc 4.2.1 and the remaining dependencies from macports, i.e. python
2.7,.2 swig 2.0.4, mercurial 2.0. The changes include an adaptation of
the SConstruct to handle non-library linker flags, and Darwin-specific
code to find the memory usage of gem5. A number of Ruby files relied
on ambigious uint (without the 32 suffix) which caused compilation
errors.

testers: move testers to a new directory

This patch moves the testers to a new subdirectory under src/cpu and includes
the necessary fixes to work with latest m5 initialization patches.