misc: Rename misc.(hh|cc) to logging.(hh|cc)

These files aren't a collection of miscellaneous stuff, they're the
definition of the Logger interface, and a few utility macros for
calling into that interface (panic, warn, etc.).

Change-Id: I84267ac3f45896a83c0ef027f8f19c5e9a5667d1
Reviewed-on: https://gem5-review.googlesource.com/6226
Reviewed-by: Brandon Potter <Brandon.Potter@amd.com>
Maintainer: Gabe Black <gabeblack@google.com>

arch: Header clean up for NOISA resurrection

This patch is a first step to getting NOISA working again. A number of
redundant includes make life more difficult than it has to be and this
patch simply removes them. There are also some redundant forward
declarations removed.

includes: sort all includes

Interrupts: Inline some code and remove duplication.

params: Deprecate old-style constructors; update most SimObject constructors.

SimObjects not yet updated:
- Process and subclasses
- BaseCPU and subclasses

The SimObject(const std::string &name) constructor was removed. Subclasses
that still rely on that behavior must call the parent initializer as
: SimObject(makeParams(name))

Implement Niagara I/O interface and rework interrupts

configs/common/FSConfig.py:
Use binaries we've compiled instead of the ones that come with Legion
src/arch/alpha/interrupts.hh:
get rid of post(int int_type) and add a get_vec function that gets the interrupt vector for an interrupt number
src/arch/sparc/asi.cc:
Add AsiIsInterrupt() to AsiIsMmu()
src/arch/sparc/faults.cc:
src/arch/sparc/faults.hh:
Add InterruptVector type
src/arch/sparc/interrupts.hh:
rework interrupts. They are no longer cleared when created... A I/O or ASI read/write needs to happen before they are cleared
src/arch/sparc/isa_traits.hh:
Add the "interrupt" trap types to isa traits
src/arch/sparc/miscregfile.cc:
add names for all the misc registers and possible post an interrupt when TL is changed.
src/arch/sparc/miscregfile.hh:
Add a helper function to post an interrupt when pil < some set softint
src/arch/sparc/regfile.cc:
src/arch/sparc/regfile.hh:
InterruptLevel shouldn't really live here, moved to interrupt.hh
src/arch/sparc/tlb.cc:
Add interrupt ASIs to TLB
src/arch/sparc/ua2005.cc:
Add checkSoftInt to check if a softint needs to be posted
Check that a tickCompare isn't scheduled before scheduling one
Post and clear interrupts on queue writes and what not
src/base/bitfield.hh:
Add an helper function to return the msb that is set
src/cpu/base.cc:
src/cpu/base.hh:
get rid of post_interrupt(type) since it's no longer needed.. Add a way to see what interrupts are pending
src/cpu/intr_control.cc:
src/cpu/intr_control.hh:
src/dev/alpha/tsunami_cchip.cc:
src/python/m5/objects/IntrControl.py:
Make IntrControl have a system pointer rather than using a cpu pointer to get one
src/dev/sparc/SConscript:
add iob to SConsscrip
tests/quick/10.linux-boot/ref/alpha/linux/tsunami-simple-atomic-dual/config.ini:
tests/quick/10.linux-boot/ref/alpha/linux/tsunami-simple-atomic-dual/config.out:
tests/quick/10.linux-boot/ref/alpha/linux/tsunami-simple-atomic/config.ini:
tests/quick/10.linux-boot/ref/alpha/linux/tsunami-simple-atomic/config.out:
tests/quick/10.linux-boot/ref/alpha/linux/tsunami-simple-timing-dual/config.ini:
tests/quick/10.linux-boot/ref/alpha/linux/tsunami-simple-timing-dual/config.out:
tests/quick/10.linux-boot/ref/alpha/linux/tsunami-simple-timing/config.ini:
tests/quick/10.linux-boot/ref/alpha/linux/tsunami-simple-timing/config.out:
tests/quick/80.netperf-stream/ref/alpha/linux/twosys-tsunami-simple-atomic/config.ini:
tests/quick/80.netperf-stream/ref/alpha/linux/twosys-tsunami-simple-atomic/config.out:
update config.ini/out for intrcntrl not having a cpu pointer anymore

Updated Authors from bk prs info

New directory structure:
- simulator source now in 'src' subdirectory
- imported files from 'ext' repository
- support building in arbitrary places, including
outside of the source tree. See comment at top
of SConstruct file for more details.
Regression tests are temporarily disabled; that
syetem needs more extensive revisions.

SConstruct:
Update for new directory structure.
Modify to support build trees that are not subdirectories
of the source tree. See comment at top of file for
more details.
Regression tests are temporarily disabled.
src/arch/SConscript:
src/arch/isa_parser.py:
src/python/SConscript:
Update for new directory structure.