base: Avoid dividing by zero in Time::[gs]etTick.

Those functions used the value SimClock::Int::ns which, if the time
resolution is larger than 1ns, can/will be zero. That will make
getTick always return zero, and setTick divide by zero. This change
modifies those functions so that the math they do avoids using any
integer Ticks per time unit value except for Frequency. It seems
unlikely that the Ticks will increment at less than 1Hz.

Change-Id: I5cc9db14699c00dcbff48e4593b98522b13b4ccd
Reviewed-on: https://gem5-review.googlesource.com/12573
Reviewed-by: Jason Lowe-Power <jason@lowepower.com>
Maintainer: Gabe Black <gabeblack@google.com>

misc: Rename misc.(hh|cc) to logging.(hh|cc)

These files aren't a collection of miscellaneous stuff, they're the
definition of the Logger interface, and a few utility macros for
calling into that interface (panic, warn, etc.).

Change-Id: I84267ac3f45896a83c0ef027f8f19c5e9a5667d1
Reviewed-on: https://gem5-review.googlesource.com/6226
Reviewed-by: Brandon Potter <Brandon.Potter@amd.com>
Maintainer: Gabe Black <gabeblack@google.com>

style: [patch 3/22] reduce include dependencies in some headers

Used cppclean to help identify useless includes and removed them. This
involved erroneously included headers, but also cases where forward
declarations could have been used rather than a full include.

style: [patch 1/22] use /r/3648/ to reorganize includes

sim: Refactor the serialization base class

Objects that are can be serialized are supposed to inherit from the
Serializable class. This class is meant to provide a unified API for
such objects. However, so far it has mainly been used by SimObjects
due to some fundamental design limitations. This changeset redesigns
to the serialization interface to make it more generic and hide the
underlying checkpoint storage. Specifically:

* Add a set of APIs to serialize into a subsection of the current
object. Previously, objects that needed this functionality would
use ad-hoc solutions using nameOut() and section name
generation. In the new world, an object that implements the
interface has the methods serializeSection() and
unserializeSection() that serialize into a named /subsection/ of
the current object. Calling serialize() serializes an object into
the current section.

* Move the name() method from Serializable to SimObject as it is no
longer needed for serialization. The fully qualified section name
is generated by the main serialization code on the fly as objects
serialize sub-objects.

* Add a scoped ScopedCheckpointSection helper class. Some objects
need to serialize data structures, that are not deriving from
Serializable, into subsections. Previously, this was done using
nameOut() and manual section name generation. To simplify this,
this changeset introduces a ScopedCheckpointSection() helper
class. When this class is instantiated, it adds a new /subsection/
and subsequent serialization calls during the lifetime of this
helper class happen inside this section (or a subsection in case
of nested sections).

* The serialize() call is now const which prevents accidental state
manipulation during serialization. Objects that rely on modifying
state can use the serializeOld() call instead. The default
implementation simply calls serialize(). Note: The old-style calls
need to be explicitly called using the
serializeOld()/serializeSectionOld() style APIs. These are used by
default when serializing SimObjects.

* Both the input and output checkpoints now use their own named
types. This hides underlying checkpoint implementation from
objects that need checkpointing and makes it easier to change the
underlying checkpoint storage code.

base: Revert 9277177eccff and use getenv/setenv for UTC time

This patch reverts changeset 9277177eccff which does not do what it
was intended to do. In essence, we go back to implementing mkutctime
much like the non-standard timegm extension.

misc: Use gmtime for conversion to UTC to avoid getenv/setenv

This patch changes how we turn time into UTC. Previously we
manipulated the TZ environment variable, but this has issues as the
strings that are manipulated could be tainted (see e.g. CERT
ENV34-C). Now we simply rely on the built-in gmtime function and avoid
touching getenv/setenv all together.

ARM: Add RTC device for ARM platforms.

This change implements a PL031 real time clock.

Time: Add serialization functions to the Time class.

Time: Add setTick and getTick functions to the Time class.

time: improve time datastructure

Use posix clock functions (and librt) if it is available.
Inline a bunch of functions and implement more operators.
* * *
time: more cleanup

Use the proper version of C++ headers

make our code a little more standards compliant
pretty close to compiling w/ suns compiler

briefly:
add dummy return after panic()/fatal()
split out flags by compiler vendor
include cstring and cmath where appropriate
use std namespace for string ops

SConstruct:
Add code to detect compiler and choose cflags based on detected compiler
Fix zlib check to work with suncc
src/SConscript:
split out flags by compiler vendor
src/arch/sparc/isa/decoder.isa:
use correct namespace for sqrt
src/arch/sparc/isa/formats/basic.isa:
add dummy return around panic
src/arch/sparc/isa/formats/integerop.isa:
use correct namespace for stringops
src/arch/sparc/isa/includes.isa:
include cstring and cmath where appropriate
src/arch/sparc/isa_traits.hh:
remove dangling comma
src/arch/sparc/system.cc:
dummy return to make sun cc front end happy
src/arch/sparc/tlb.cc:
src/base/compression/lzss_compression.cc:
use std namespace for string ops
src/arch/sparc/utility.hh:
no reason to say something is unsigned unsigned int
src/base/compression/null_compression.hh:
dummy returns to for suncc front end
src/base/cprintf.hh:
use standard variadic argument syntax instead of gnuc specefic renaming
src/base/hashmap.hh:
don't need to define hash for suncc
src/base/hostinfo.cc:
need stdio.h for sprintf
src/base/loader/object_file.cc:
munmap is in std namespace not null
src/base/misc.hh:
use M5 generic noreturn macros
use standard variadic macro __VA_ARGS__
src/base/pollevent.cc:
we need file.h for file flags
src/base/random.cc:
mess with include files to make suncc happy
src/base/remote_gdb.cc:
malloc memory for function instead of having a non-constant in an array size
src/base/statistics.hh:
use std namespace for floor
src/base/stats/text.cc:
include math.h for rint (cmath won't work)
src/base/time.cc:
use suncc version of ctime_r
src/base/time.hh:
change macro to work with both gcc and suncc
src/base/timebuf.hh:
include cstring from memset and use std::
src/base/trace.hh:
change variadic macros to be normal format
src/cpu/SConscript:
add dummy returns where appropriate
src/cpu/activity.cc:
include cstring for memset
src/cpu/exetrace.hh:
include cstring fro memcpy
src/cpu/simple/base.hh:
add dummy return for panic
src/dev/baddev.cc:
src/dev/pciconfigall.cc:
src/dev/platform.cc:
src/dev/sparc/t1000.cc:
add dummy return where appropriate
src/dev/ide_atareg.h:
make define work for both gnuc and suncc
src/dev/io_device.hh:
add dummy returns where approirate
src/dev/pcidev.hh:
src/mem/cache/cache_impl.hh:
src/mem/cache/miss/blocking_buffer.cc:
src/mem/cache/tags/lru.hh:
src/mem/cache/tags/split.hh:
src/mem/cache/tags/split_lifo.hh:
src/mem/cache/tags/split_lru.hh:
src/mem/dram.cc:
src/mem/packet.cc:
src/mem/port.cc:
include cstring for string ops
src/dev/sparc/mm_disk.cc:
add dummy return where appropriate
include cstring for string ops
src/mem/cache/miss/blocking_buffer.hh:
src/mem/port.hh:
Add dummy return where appropriate
src/mem/cache/tags/iic.cc:
cast hastSets to double for log() call
src/mem/physical.cc:
cast pmemAddr to char* for munmap
src/sim/byteswap.hh:
make define work for suncc and gnuc

Updated Authors from bk prs info

New directory structure:
- simulator source now in 'src' subdirectory
- imported files from 'ext' repository
- support building in arbitrary places, including
outside of the source tree. See comment at top
of SConstruct file for more details.
Regression tests are temporarily disabled; that
syetem needs more extensive revisions.

SConstruct:
Update for new directory structure.
Modify to support build trees that are not subdirectories
of the source tree. See comment at top of file for
more details.
Regression tests are temporarily disabled.
src/arch/SConscript:
src/arch/isa_parser.py:
src/python/SConscript:
Update for new directory structure.