db.py revision 1758
11758Ssaidi@eecs.umich.edu 21758Ssaidi@eecs.umich.edu# Copyright (c) 2003-2004 The Regents of The University of Michigan 31758Ssaidi@eecs.umich.edu# All rights reserved. 41758Ssaidi@eecs.umich.edu# 51758Ssaidi@eecs.umich.edu# Redistribution and use in source and binary forms, with or without 61758Ssaidi@eecs.umich.edu# modification, are permitted provided that the following conditions are 71758Ssaidi@eecs.umich.edu# met: redistributions of source code must retain the above copyright 81758Ssaidi@eecs.umich.edu# notice, this list of conditions and the following disclaimer; 91758Ssaidi@eecs.umich.edu# redistributions in binary form must reproduce the above copyright 101758Ssaidi@eecs.umich.edu# notice, this list of conditions and the following disclaimer in the 111758Ssaidi@eecs.umich.edu# documentation and/or other materials provided with the distribution; 121758Ssaidi@eecs.umich.edu# neither the name of the copyright holders nor the names of its 131758Ssaidi@eecs.umich.edu# contributors may be used to endorse or promote products derived from 141758Ssaidi@eecs.umich.edu# this software without specific prior written permission. 151758Ssaidi@eecs.umich.edu# 161758Ssaidi@eecs.umich.edu# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS 171758Ssaidi@eecs.umich.edu# "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT 181758Ssaidi@eecs.umich.edu# LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR 191758Ssaidi@eecs.umich.edu# A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT 201758Ssaidi@eecs.umich.edu# OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, 211758Ssaidi@eecs.umich.edu# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT 221758Ssaidi@eecs.umich.edu# LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, 231758Ssaidi@eecs.umich.edu# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY 241758Ssaidi@eecs.umich.edu# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT 251758Ssaidi@eecs.umich.edu# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE 261758Ssaidi@eecs.umich.edu# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 271758Ssaidi@eecs.umich.edu 281758Ssaidi@eecs.umich.edu#Permission is granted to use, copy, create derivative works and 291758Ssaidi@eecs.umich.edu#redistribute this software and such derivative works for any purpose, 301758Ssaidi@eecs.umich.edu#so long as the copyright notice above, this grant of permission, and 311758Ssaidi@eecs.umich.edu#the disclaimer below appear in all copies made; and so long as the 321758Ssaidi@eecs.umich.edu#name of The University of Michigan is not used in any advertising or 331758Ssaidi@eecs.umich.edu#publicity pertaining to the use or distribution of this software 341758Ssaidi@eecs.umich.edu#without specific, written prior authorization. 351758Ssaidi@eecs.umich.edu# 361758Ssaidi@eecs.umich.edu#THIS SOFTWARE IS PROVIDED AS IS, WITHOUT REPRESENTATION FROM THE 371758Ssaidi@eecs.umich.edu#UNIVERSITY OF MICHIGAN AS TO ITS FITNESS FOR ANY PURPOSE, AND WITHOUT 381758Ssaidi@eecs.umich.edu#WARRANTY BY THE UNIVERSITY OF MICHIGAN OF ANY KIND, EITHER EXPRESS OR 391758Ssaidi@eecs.umich.edu#IMPLIED, INCLUDING WITHOUT LIMITATION THE IMPLIED WARRANTIES OF 401758Ssaidi@eecs.umich.edu#MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE REGENTS OF 411758Ssaidi@eecs.umich.edu#THE UNIVERSITY OF MICHIGAN SHALL NOT BE LIABLE FOR ANY DAMAGES, 421758Ssaidi@eecs.umich.edu#INCLUDING DIRECT, SPECIAL, INDIRECT, INCIDENTAL, OR CONSEQUENTIAL 431758Ssaidi@eecs.umich.edu#DAMAGES, WITH RESPECT TO ANY CLAIM ARISING OUT OF OR IN CONNECTION 441758Ssaidi@eecs.umich.edu#WITH THE USE OF THE SOFTWARE, EVEN IF IT HAS BEEN OR IS HEREAFTER 451758Ssaidi@eecs.umich.edu#ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. 461758Ssaidi@eecs.umich.edu 471049Sbinkertn@umich.eduimport MySQLdb, re, string 481049Sbinkertn@umich.edu 491049Sbinkertn@umich.edudef statcmp(a, b): 501049Sbinkertn@umich.edu v1 = a.split('.') 511049Sbinkertn@umich.edu v2 = b.split('.') 521049Sbinkertn@umich.edu 531049Sbinkertn@umich.edu last = min(len(v1), len(v2)) - 1 541049Sbinkertn@umich.edu for i,j in zip(v1[0:last], v2[0:last]): 551049Sbinkertn@umich.edu if i != j: 561049Sbinkertn@umich.edu return cmp(i, j) 571049Sbinkertn@umich.edu 581049Sbinkertn@umich.edu # Special compare for last element. 591049Sbinkertn@umich.edu if len(v1) == len(v2): 601049Sbinkertn@umich.edu return cmp(v1[last], v2[last]) 611049Sbinkertn@umich.edu else: 621049Sbinkertn@umich.edu return cmp(len(v1), len(v2)) 631049Sbinkertn@umich.edu 641049Sbinkertn@umich.educlass RunData: 651049Sbinkertn@umich.edu def __init__(self, row): 661049Sbinkertn@umich.edu self.run = int(row[0]) 671049Sbinkertn@umich.edu self.name = row[1] 681049Sbinkertn@umich.edu self.user = row[2] 691049Sbinkertn@umich.edu self.project = row[3] 701049Sbinkertn@umich.edu 711049Sbinkertn@umich.educlass SubData: 721049Sbinkertn@umich.edu def __init__(self, row): 731049Sbinkertn@umich.edu self.stat = int(row[0]) 741049Sbinkertn@umich.edu self.x = int(row[1]) 751049Sbinkertn@umich.edu self.y = int(row[2]) 761049Sbinkertn@umich.edu self.name = row[3] 771049Sbinkertn@umich.edu self.descr = row[4] 781049Sbinkertn@umich.edu 791049Sbinkertn@umich.educlass Data: 801049Sbinkertn@umich.edu def __init__(self, row): 811049Sbinkertn@umich.edu if len(row) != 5: 821049Sbinkertn@umich.edu raise 'stat db error' 831049Sbinkertn@umich.edu self.stat = int(row[0]) 841049Sbinkertn@umich.edu self.run = int(row[1]) 851049Sbinkertn@umich.edu self.x = int(row[2]) 861049Sbinkertn@umich.edu self.y = int(row[3]) 871049Sbinkertn@umich.edu self.data = float(row[4]) 881049Sbinkertn@umich.edu 891049Sbinkertn@umich.edu def __repr__(self): 901049Sbinkertn@umich.edu return '''Data(['%d', '%d', '%d', '%d', '%f'])''' % ( self.stat, 911049Sbinkertn@umich.edu self.run, self.x, self.y, self.data) 921049Sbinkertn@umich.edu 931049Sbinkertn@umich.educlass StatData(object): 941049Sbinkertn@umich.edu def __init__(self, row): 951049Sbinkertn@umich.edu self.stat = int(row[0]) 961049Sbinkertn@umich.edu self.name = row[1] 971049Sbinkertn@umich.edu self.desc = row[2] 981049Sbinkertn@umich.edu self.type = row[3] 991049Sbinkertn@umich.edu self.prereq = int(row[5]) 1001049Sbinkertn@umich.edu self.precision = int(row[6]) 1011049Sbinkertn@umich.edu 1021049Sbinkertn@umich.edu import flags 1031049Sbinkertn@umich.edu self.flags = 0 1041049Sbinkertn@umich.edu if int(row[4]): self.flags |= flags.printable 1051049Sbinkertn@umich.edu if int(row[7]): self.flags |= flags.nozero 1061049Sbinkertn@umich.edu if int(row[8]): self.flags |= flags.nonan 1071049Sbinkertn@umich.edu if int(row[9]): self.flags |= flags.total 1081049Sbinkertn@umich.edu if int(row[10]): self.flags |= flags.pdf 1091049Sbinkertn@umich.edu if int(row[11]): self.flags |= flags.cdf 1101049Sbinkertn@umich.edu 1111049Sbinkertn@umich.edu if self.type == 'DIST' or self.type == 'VECTORDIST': 1121049Sbinkertn@umich.edu self.min = float(row[12]) 1131049Sbinkertn@umich.edu self.max = float(row[13]) 1141049Sbinkertn@umich.edu self.bktsize = float(row[14]) 1151049Sbinkertn@umich.edu self.size = int(row[15]) 1161049Sbinkertn@umich.edu 1171049Sbinkertn@umich.edu if self.type == 'FORMULA': 1181049Sbinkertn@umich.edu self.formula = self.db.allFormulas[self.stat] 1191049Sbinkertn@umich.edu 1201049Sbinkertn@umich.educlass Node(object): 1211049Sbinkertn@umich.edu def __init__(self, name): 1221049Sbinkertn@umich.edu self.name = name 1231049Sbinkertn@umich.edu def __str__(self): 1241049Sbinkertn@umich.edu return name 1251049Sbinkertn@umich.edu 1261049Sbinkertn@umich.educlass Database(object): 1271049Sbinkertn@umich.edu def __init__(self): 1281049Sbinkertn@umich.edu self.host = 'zizzer.pool' 1291049Sbinkertn@umich.edu self.user = '' 1301049Sbinkertn@umich.edu self.passwd = '' 1311049Sbinkertn@umich.edu self.db = 'm5stats' 1321049Sbinkertn@umich.edu self.cursor = None 1331049Sbinkertn@umich.edu 1341049Sbinkertn@umich.edu self.allStats = [] 1351049Sbinkertn@umich.edu self.allStatIds = {} 1361049Sbinkertn@umich.edu self.allStatNames = {} 1371049Sbinkertn@umich.edu 1381049Sbinkertn@umich.edu self.allSubData = {} 1391049Sbinkertn@umich.edu 1401049Sbinkertn@umich.edu self.allRuns = [] 1411049Sbinkertn@umich.edu self.allRunIds = {} 1421049Sbinkertn@umich.edu self.allRunNames = {} 1431049Sbinkertn@umich.edu 1441049Sbinkertn@umich.edu self.allBins = [] 1451049Sbinkertn@umich.edu self.allBinIds = {} 1461049Sbinkertn@umich.edu self.allBinNames = {} 1471049Sbinkertn@umich.edu 1481049Sbinkertn@umich.edu self.allFormulas = {} 1491049Sbinkertn@umich.edu 1501049Sbinkertn@umich.edu self.stattop = {} 1511049Sbinkertn@umich.edu self.statdict = {} 1521049Sbinkertn@umich.edu self.statlist = [] 1531049Sbinkertn@umich.edu 1541049Sbinkertn@umich.edu self.mode = 'sum'; 1551049Sbinkertn@umich.edu self.runs = None 1561049Sbinkertn@umich.edu self.bins = None 1571049Sbinkertn@umich.edu self.ticks = None 1581049Sbinkertn@umich.edu self.__dict__['get'] = type(self).sum 1591049Sbinkertn@umich.edu 1601049Sbinkertn@umich.edu def query(self, sql): 1611049Sbinkertn@umich.edu self.cursor.execute(sql) 1621049Sbinkertn@umich.edu 1631049Sbinkertn@umich.edu def update_dict(self, dict): 1641049Sbinkertn@umich.edu dict.update(self.stattop) 1651049Sbinkertn@umich.edu 1661049Sbinkertn@umich.edu def append(self, stat): 1671049Sbinkertn@umich.edu statname = re.sub(':', '__', stat.name) 1681049Sbinkertn@umich.edu path = string.split(statname, '.') 1691049Sbinkertn@umich.edu pathtop = path[0] 1701049Sbinkertn@umich.edu fullname = '' 1711049Sbinkertn@umich.edu 1721049Sbinkertn@umich.edu x = self 1731049Sbinkertn@umich.edu while len(path) > 1: 1741049Sbinkertn@umich.edu name = path.pop(0) 1751049Sbinkertn@umich.edu if not x.__dict__.has_key(name): 1761049Sbinkertn@umich.edu x.__dict__[name] = Node(fullname + name) 1771049Sbinkertn@umich.edu x = x.__dict__[name] 1781049Sbinkertn@umich.edu fullname = '%s%s.' % (fullname, name) 1791049Sbinkertn@umich.edu 1801049Sbinkertn@umich.edu name = path.pop(0) 1811049Sbinkertn@umich.edu x.__dict__[name] = stat 1821049Sbinkertn@umich.edu 1831049Sbinkertn@umich.edu self.stattop[pathtop] = self.__dict__[pathtop] 1841049Sbinkertn@umich.edu self.statdict[statname] = stat 1851049Sbinkertn@umich.edu self.statlist.append(statname) 1861049Sbinkertn@umich.edu 1871049Sbinkertn@umich.edu def connect(self): 1881049Sbinkertn@umich.edu # connect 1891049Sbinkertn@umich.edu self.thedb = MySQLdb.connect(db=self.db, 1901049Sbinkertn@umich.edu host=self.host, 1911049Sbinkertn@umich.edu user=self.user, 1921049Sbinkertn@umich.edu passwd=self.passwd) 1931049Sbinkertn@umich.edu 1941049Sbinkertn@umich.edu # create a cursor 1951049Sbinkertn@umich.edu self.cursor = self.thedb.cursor() 1961049Sbinkertn@umich.edu 1971049Sbinkertn@umich.edu self.query('''select rn_id,rn_name,rn_sample,rn_user,rn_project 1981049Sbinkertn@umich.edu from runs''') 1991049Sbinkertn@umich.edu for result in self.cursor.fetchall(): 2001049Sbinkertn@umich.edu run = RunData(result); 2011049Sbinkertn@umich.edu self.allRuns.append(run) 2021049Sbinkertn@umich.edu self.allRunIds[run.run] = run 2031049Sbinkertn@umich.edu self.allRunNames[run.name] = run 2041049Sbinkertn@umich.edu 2051049Sbinkertn@umich.edu self.query('select * from bins') 2061049Sbinkertn@umich.edu for id,name in self.cursor.fetchall(): 2071049Sbinkertn@umich.edu self.allBinIds[int(id)] = name 2081049Sbinkertn@umich.edu self.allBinNames[name] = int(id) 2091049Sbinkertn@umich.edu 2101049Sbinkertn@umich.edu self.query('select sd_stat,sd_x,sd_y,sd_name,sd_descr from subdata') 2111049Sbinkertn@umich.edu for result in self.cursor.fetchall(): 2121049Sbinkertn@umich.edu subdata = SubData(result) 2131049Sbinkertn@umich.edu if self.allSubData.has_key(subdata.stat): 2141049Sbinkertn@umich.edu self.allSubData[subdata.stat].append(subdata) 2151049Sbinkertn@umich.edu else: 2161049Sbinkertn@umich.edu self.allSubData[subdata.stat] = [ subdata ] 2171049Sbinkertn@umich.edu 2181049Sbinkertn@umich.edu self.query('select * from formulas') 2191049Sbinkertn@umich.edu for id,formula in self.cursor.fetchall(): 2201306Sbinkertn@umich.edu self.allFormulas[int(id)] = formula.tostring() 2211049Sbinkertn@umich.edu 2221049Sbinkertn@umich.edu StatData.db = self 2231049Sbinkertn@umich.edu self.query('select * from stats') 2241049Sbinkertn@umich.edu import info 2251049Sbinkertn@umich.edu for result in self.cursor.fetchall(): 2261049Sbinkertn@umich.edu stat = info.NewStat(StatData(result)) 2271049Sbinkertn@umich.edu self.append(stat) 2281049Sbinkertn@umich.edu self.allStats.append(stat) 2291049Sbinkertn@umich.edu self.allStatIds[stat.stat] = stat 2301049Sbinkertn@umich.edu self.allStatNames[stat.name] = stat 2311049Sbinkertn@umich.edu 2321049Sbinkertn@umich.edu # Name: listbins 2331049Sbinkertn@umich.edu # Desc: Prints all bins matching regex argument, if no argument 2341049Sbinkertn@umich.edu # is given all bins are returned 2351049Sbinkertn@umich.edu def listBins(self, regex='.*'): 2361049Sbinkertn@umich.edu print '%-50s %-10s' % ('bin name', 'id') 2371049Sbinkertn@umich.edu print '-' * 61 2381049Sbinkertn@umich.edu names = self.allBinNames.keys() 2391049Sbinkertn@umich.edu names.sort() 2401049Sbinkertn@umich.edu for name in names: 2411049Sbinkertn@umich.edu id = self.allBinNames[name] 2421049Sbinkertn@umich.edu print '%-50s %-10d' % (name, id) 2431049Sbinkertn@umich.edu 2441049Sbinkertn@umich.edu # Name: listruns 2451049Sbinkertn@umich.edu # Desc: Prints all runs matching a given user, if no argument 2461049Sbinkertn@umich.edu # is given all runs are returned 2471049Sbinkertn@umich.edu def listRuns(self, user=None): 2481049Sbinkertn@umich.edu print '%-40s %-10s %-5s' % ('run name', 'user', 'id') 2491049Sbinkertn@umich.edu print '-' * 62 2501049Sbinkertn@umich.edu for run in self.allRuns: 2511049Sbinkertn@umich.edu if user == None or user == run.user: 2521049Sbinkertn@umich.edu print '%-40s %-10s %-10d' % (run.name, run.user, run.run) 2531049Sbinkertn@umich.edu 2541049Sbinkertn@umich.edu # Name: listTicks 2551049Sbinkertn@umich.edu # Desc: Prints all samples for a given run 2561309Ssaidi@eecs.umich.edu def listTicks(self, runs=None): 2571049Sbinkertn@umich.edu print "tick" 2581049Sbinkertn@umich.edu print "----------------------------------------" 2591309Ssaidi@eecs.umich.edu sql = 'select distinct dt_tick from data where dt_stat=1180 and (' 2601309Ssaidi@eecs.umich.edu if runs != None: 2611309Ssaidi@eecs.umich.edu first = True 2621309Ssaidi@eecs.umich.edu for run in runs: 2631309Ssaidi@eecs.umich.edu if first: 2641309Ssaidi@eecs.umich.edu # sql += ' where' 2651309Ssaidi@eecs.umich.edu first = False 2661309Ssaidi@eecs.umich.edu else: 2671309Ssaidi@eecs.umich.edu sql += ' or' 2681309Ssaidi@eecs.umich.edu sql += ' dt_run=%s' % run.run 2691309Ssaidi@eecs.umich.edu sql += ')' 2701049Sbinkertn@umich.edu self.query(sql) 2711049Sbinkertn@umich.edu for r in self.cursor.fetchall(): 2721049Sbinkertn@umich.edu print r[0] 2731049Sbinkertn@umich.edu 2741309Ssaidi@eecs.umich.edu # Name: retTicks 2751309Ssaidi@eecs.umich.edu # Desc: Prints all samples for a given run 2761309Ssaidi@eecs.umich.edu def retTicks(self, runs=None): 2771309Ssaidi@eecs.umich.edu sql = 'select distinct dt_tick from data where dt_stat=1180 and (' 2781309Ssaidi@eecs.umich.edu if runs != None: 2791309Ssaidi@eecs.umich.edu first = True 2801309Ssaidi@eecs.umich.edu for run in runs: 2811309Ssaidi@eecs.umich.edu if first: 2821309Ssaidi@eecs.umich.edu first = False 2831309Ssaidi@eecs.umich.edu else: 2841309Ssaidi@eecs.umich.edu sql += ' or' 2851309Ssaidi@eecs.umich.edu sql += ' dt_run=%s' % run.run 2861309Ssaidi@eecs.umich.edu sql += ')' 2871309Ssaidi@eecs.umich.edu self.query(sql) 2881309Ssaidi@eecs.umich.edu ret = [] 2891309Ssaidi@eecs.umich.edu for r in self.cursor.fetchall(): 2901309Ssaidi@eecs.umich.edu ret.append(r[0]) 2911309Ssaidi@eecs.umich.edu return ret 2921309Ssaidi@eecs.umich.edu 2931049Sbinkertn@umich.edu # Name: liststats 2941049Sbinkertn@umich.edu # Desc: Prints all statistics that appear in the database, 2951049Sbinkertn@umich.edu # the optional argument is a regular expression that can 2961049Sbinkertn@umich.edu # be used to prune the result set 2971049Sbinkertn@umich.edu def listStats(self, regex=None): 2981049Sbinkertn@umich.edu print '%-60s %-8s %-10s' % ('stat name', 'id', 'type') 2991049Sbinkertn@umich.edu print '-' * 80 3001049Sbinkertn@umich.edu 3011049Sbinkertn@umich.edu rx = None 3021049Sbinkertn@umich.edu if regex != None: 3031049Sbinkertn@umich.edu rx = re.compile(regex) 3041049Sbinkertn@umich.edu 3051049Sbinkertn@umich.edu stats = [ stat.name for stat in self.allStats ] 3061049Sbinkertn@umich.edu stats.sort(statcmp) 3071049Sbinkertn@umich.edu for stat in stats: 3081049Sbinkertn@umich.edu stat = self.allStatNames[stat] 3091049Sbinkertn@umich.edu if rx == None or rx.match(stat.name): 3101049Sbinkertn@umich.edu print '%-60s %-8s %-10s' % (stat.name, stat.stat, stat.type) 3111049Sbinkertn@umich.edu 3121049Sbinkertn@umich.edu # Name: liststats 3131049Sbinkertn@umich.edu # Desc: Prints all statistics that appear in the database, 3141049Sbinkertn@umich.edu # the optional argument is a regular expression that can 3151049Sbinkertn@umich.edu # be used to prune the result set 3161049Sbinkertn@umich.edu def listFormulas(self, regex=None): 3171049Sbinkertn@umich.edu print '%-60s %s' % ('formula name', 'formula') 3181049Sbinkertn@umich.edu print '-' * 80 3191049Sbinkertn@umich.edu 3201049Sbinkertn@umich.edu rx = None 3211049Sbinkertn@umich.edu if regex != None: 3221049Sbinkertn@umich.edu rx = re.compile(regex) 3231049Sbinkertn@umich.edu 3241049Sbinkertn@umich.edu stats = [ stat.name for stat in self.allStats ] 3251049Sbinkertn@umich.edu stats.sort(statcmp) 3261049Sbinkertn@umich.edu for stat in stats: 3271049Sbinkertn@umich.edu stat = self.allStatNames[stat] 3281049Sbinkertn@umich.edu if stat.type == 'FORMULA' and (rx == None or rx.match(stat.name)): 3291049Sbinkertn@umich.edu print '%-60s %s' % (stat.name, self.allFormulas[stat.stat]) 3301049Sbinkertn@umich.edu 3311049Sbinkertn@umich.edu def getStat(self, stats): 3321049Sbinkertn@umich.edu if type(stats) is not list: 3331049Sbinkertn@umich.edu stats = [ stats ] 3341049Sbinkertn@umich.edu 3351049Sbinkertn@umich.edu ret = [] 3361049Sbinkertn@umich.edu for stat in stats: 3371049Sbinkertn@umich.edu if type(stat) is int: 3381049Sbinkertn@umich.edu ret.append(self.allStatIds[stat]) 3391049Sbinkertn@umich.edu 3401049Sbinkertn@umich.edu if type(stat) is str: 3411049Sbinkertn@umich.edu rx = re.compile(stat) 3421049Sbinkertn@umich.edu for stat in self.allStats: 3431049Sbinkertn@umich.edu if rx.match(stat.name): 3441049Sbinkertn@umich.edu ret.append(stat) 3451049Sbinkertn@umich.edu return ret 3461049Sbinkertn@umich.edu 3471049Sbinkertn@umich.edu def getBin(self, bins): 3481049Sbinkertn@umich.edu if type(bins) is not list: 3491049Sbinkertn@umich.edu bins = [ bins ] 3501049Sbinkertn@umich.edu 3511049Sbinkertn@umich.edu ret = [] 3521049Sbinkertn@umich.edu for bin in bins: 3531049Sbinkertn@umich.edu if type(bin) is int: 3541049Sbinkertn@umich.edu ret.append(bin) 3551049Sbinkertn@umich.edu elif type(bin) is str: 3561049Sbinkertn@umich.edu ret.append(self.allBinNames[bin]) 3571049Sbinkertn@umich.edu else: 3581049Sbinkertn@umich.edu for name,id in self.allBinNames.items(): 3591049Sbinkertn@umich.edu if bin.match(name): 3601049Sbinkertn@umich.edu ret.append(id) 3611049Sbinkertn@umich.edu 3621049Sbinkertn@umich.edu return ret 3631049Sbinkertn@umich.edu 3641049Sbinkertn@umich.edu def getNotBin(self, bin): 3651049Sbinkertn@umich.edu map = {} 3661049Sbinkertn@umich.edu for bin in getBin(bin): 3671049Sbinkertn@umich.edu map[bin] = 1 3681049Sbinkertn@umich.edu 3691049Sbinkertn@umich.edu ret = [] 3701049Sbinkertn@umich.edu for bin in self.allBinIds.keys(): 3711049Sbinkertn@umich.edu if not map.has_key(bin): 3721049Sbinkertn@umich.edu ret.append(bin) 3731049Sbinkertn@umich.edu 3741049Sbinkertn@umich.edu return ret 3751049Sbinkertn@umich.edu 3761049Sbinkertn@umich.edu ######################################### 3771049Sbinkertn@umich.edu # get the data 3781049Sbinkertn@umich.edu # 3791049Sbinkertn@umich.edu def inner(self, op, stat, bins, ticks, group=False): 3801049Sbinkertn@umich.edu sql = 'select ' 3811049Sbinkertn@umich.edu sql += 'dt_stat as stat, ' 3821049Sbinkertn@umich.edu sql += 'dt_run as run, ' 3831049Sbinkertn@umich.edu sql += 'dt_x as x, ' 3841049Sbinkertn@umich.edu sql += 'dt_y as y, ' 3851049Sbinkertn@umich.edu if group: 3861049Sbinkertn@umich.edu sql += 'dt_tick as tick, ' 3871049Sbinkertn@umich.edu sql += '%s(dt_data) as data ' % op 3881049Sbinkertn@umich.edu sql += 'from data ' 3891049Sbinkertn@umich.edu sql += 'where ' 3901049Sbinkertn@umich.edu 3911049Sbinkertn@umich.edu if isinstance(stat, list): 3921049Sbinkertn@umich.edu val = ' or '.join([ 'dt_stat=%d' % s.stat for s in stat ]) 3931049Sbinkertn@umich.edu sql += ' (%s)' % val 3941049Sbinkertn@umich.edu else: 3951049Sbinkertn@umich.edu sql += ' dt_stat=%d' % stat.stat 3961049Sbinkertn@umich.edu 3971049Sbinkertn@umich.edu if self.runs != None and len(self.runs): 3981049Sbinkertn@umich.edu val = ' or '.join([ 'dt_run=%d' % r for r in self.runs ]) 3991049Sbinkertn@umich.edu sql += ' and (%s)' % val 4001049Sbinkertn@umich.edu 4011049Sbinkertn@umich.edu if bins != None and len(bins): 4021049Sbinkertn@umich.edu val = ' or '.join([ 'dt_bin=%d' % b for b in bins ]) 4031049Sbinkertn@umich.edu sql += ' and (%s)' % val 4041049Sbinkertn@umich.edu 4051049Sbinkertn@umich.edu if ticks != None and len(ticks): 4061049Sbinkertn@umich.edu val = ' or '.join([ 'dt_tick=%d' % s for s in ticks ]) 4071049Sbinkertn@umich.edu sql += ' and (%s)' % val 4081049Sbinkertn@umich.edu 4091049Sbinkertn@umich.edu sql += ' group by dt_stat,dt_run,dt_x,dt_y' 4101049Sbinkertn@umich.edu if group: 4111049Sbinkertn@umich.edu sql += ',dt_tick' 4121049Sbinkertn@umich.edu return sql 4131049Sbinkertn@umich.edu 4141049Sbinkertn@umich.edu def outer(self, op_out, op_in, stat, bins, ticks): 4151049Sbinkertn@umich.edu sql = self.inner(op_in, stat, bins, ticks, True) 4161049Sbinkertn@umich.edu sql = 'select stat,run,x,y,%s(data) from (%s) as tb ' % (op_out, sql) 4171049Sbinkertn@umich.edu sql += 'group by stat,run,x,y' 4181049Sbinkertn@umich.edu return sql 4191049Sbinkertn@umich.edu 4201049Sbinkertn@umich.edu # Name: sum 4211049Sbinkertn@umich.edu # Desc: given a run, a stat and an array of samples and bins, 4221049Sbinkertn@umich.edu # sum all the bins and then get the standard deviation of the 4231049Sbinkertn@umich.edu # samples for non-binned runs. This will just return the average 4241049Sbinkertn@umich.edu # of samples, however a bin array still must be passed 4251049Sbinkertn@umich.edu def sum(self, stat, bins, ticks): 4261049Sbinkertn@umich.edu return self.inner('sum', stat, bins, ticks) 4271049Sbinkertn@umich.edu 4281049Sbinkertn@umich.edu # Name: avg 4291049Sbinkertn@umich.edu # Desc: given a run, a stat and an array of samples and bins, 4301049Sbinkertn@umich.edu # sum all the bins and then average the samples for non-binned 4311049Sbinkertn@umich.edu # runs this will just return the average of samples, however 4321049Sbinkertn@umich.edu # a bin array still must be passed 4331049Sbinkertn@umich.edu def avg(self, stat, bins, ticks): 4341049Sbinkertn@umich.edu return self.outer('avg', 'sum', stat, bins, ticks) 4351049Sbinkertn@umich.edu 4361049Sbinkertn@umich.edu # Name: stdev 4371049Sbinkertn@umich.edu # Desc: given a run, a stat and an array of samples and bins, 4381049Sbinkertn@umich.edu # sum all the bins and then get the standard deviation of the 4391049Sbinkertn@umich.edu # samples for non-binned runs. This will just return the average 4401049Sbinkertn@umich.edu # of samples, however a bin array still must be passed 4411049Sbinkertn@umich.edu def stdev(self, stat, bins, ticks): 4421049Sbinkertn@umich.edu return self.outer('stddev', 'sum', stat, bins, ticks) 4431049Sbinkertn@umich.edu 4441049Sbinkertn@umich.edu def __getattribute__(self, attr): 4451049Sbinkertn@umich.edu if attr != 'get': 4461049Sbinkertn@umich.edu return super(Database, self).__getattribute__(attr) 4471049Sbinkertn@umich.edu 4481049Sbinkertn@umich.edu if self.__dict__['get'] == type(self).sum: 4491049Sbinkertn@umich.edu return 'sum' 4501049Sbinkertn@umich.edu elif self.__dict__['get'] == type(self).avg: 4511049Sbinkertn@umich.edu return 'avg' 4521049Sbinkertn@umich.edu elif self.__dict__['get'] == type(self).stdev: 4531049Sbinkertn@umich.edu return 'stdev' 4541049Sbinkertn@umich.edu else: 4551049Sbinkertn@umich.edu return '' 4561049Sbinkertn@umich.edu 4571049Sbinkertn@umich.edu def __setattr__(self, attr, value): 4581049Sbinkertn@umich.edu if attr != 'get': 4591049Sbinkertn@umich.edu super(Database, self).__setattr__(attr, value) 4601049Sbinkertn@umich.edu return 4611049Sbinkertn@umich.edu 4621049Sbinkertn@umich.edu if value == 'sum': 4631049Sbinkertn@umich.edu self.__dict__['get'] = type(self).sum 4641049Sbinkertn@umich.edu elif value == 'avg': 4651049Sbinkertn@umich.edu self.__dict__['get'] = type(self).avg 4661049Sbinkertn@umich.edu elif value == 'stdev': 4671049Sbinkertn@umich.edu self.__dict__['get'] = type(self).stdev 4681049Sbinkertn@umich.edu else: 4691049Sbinkertn@umich.edu raise AttributeError, "can only set get to: sum | avg | stdev" 4701049Sbinkertn@umich.edu 4711049Sbinkertn@umich.edu def data(self, stat, bins=None, ticks=None): 4721049Sbinkertn@umich.edu if bins is None: 4731049Sbinkertn@umich.edu bins = self.bins 4741049Sbinkertn@umich.edu if ticks is None: 4751049Sbinkertn@umich.edu ticks = self.ticks 4761049Sbinkertn@umich.edu sql = self.__dict__['get'](self, stat, bins, ticks) 4771049Sbinkertn@umich.edu self.query(sql) 4781049Sbinkertn@umich.edu 4791049Sbinkertn@umich.edu runs = {} 4801049Sbinkertn@umich.edu for x in self.cursor.fetchall(): 4811049Sbinkertn@umich.edu data = Data(x) 4821049Sbinkertn@umich.edu if not runs.has_key(data.run): 4831049Sbinkertn@umich.edu runs[data.run] = {} 4841049Sbinkertn@umich.edu if not runs[data.run].has_key(data.x): 4851049Sbinkertn@umich.edu runs[data.run][data.x] = {} 4861049Sbinkertn@umich.edu 4871049Sbinkertn@umich.edu runs[data.run][data.x][data.y] = data.data 4881049Sbinkertn@umich.edu return runs 489