send.py revision 1816
11376Sbinkertn@umich.edu#!/usr/bin/env python
21376Sbinkertn@umich.edu# Copyright (c) 2005 The Regents of The University of Michigan
31376Sbinkertn@umich.edu# All rights reserved.
41376Sbinkertn@umich.edu#
51376Sbinkertn@umich.edu# Redistribution and use in source and binary forms, with or without
61376Sbinkertn@umich.edu# modification, are permitted provided that the following conditions are
71376Sbinkertn@umich.edu# met: redistributions of source code must retain the above copyright
81376Sbinkertn@umich.edu# notice, this list of conditions and the following disclaimer;
91376Sbinkertn@umich.edu# redistributions in binary form must reproduce the above copyright
101376Sbinkertn@umich.edu# notice, this list of conditions and the following disclaimer in the
111376Sbinkertn@umich.edu# documentation and/or other materials provided with the distribution;
121376Sbinkertn@umich.edu# neither the name of the copyright holders nor the names of its
131376Sbinkertn@umich.edu# contributors may be used to endorse or promote products derived from
141376Sbinkertn@umich.edu# this software without specific prior written permission.
151376Sbinkertn@umich.edu#
161376Sbinkertn@umich.edu# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
171376Sbinkertn@umich.edu# "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
181376Sbinkertn@umich.edu# LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
191376Sbinkertn@umich.edu# A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
201376Sbinkertn@umich.edu# OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
211376Sbinkertn@umich.edu# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
221376Sbinkertn@umich.edu# LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
231376Sbinkertn@umich.edu# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
241376Sbinkertn@umich.edu# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
251376Sbinkertn@umich.edu# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
261376Sbinkertn@umich.edu# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
271376Sbinkertn@umich.edu#
281376Sbinkertn@umich.edu# Authors: Ali Saidi
291376Sbinkertn@umich.edu#          Nathan Binkert
301376Sbinkertn@umich.edu
311385Sbinkertn@umich.eduimport os, os.path, re, socket, sys
321376Sbinkertn@umich.edufrom os import environ as env, listdir
331816Sbinkertn@umich.edufrom os.path import basename, isdir, isfile, islink, join as joinpath, normpath
341376Sbinkertn@umich.edufrom filecmp import cmp as filecmp
351816Sbinkertn@umich.edufrom shutil import copy
361376Sbinkertn@umich.edu
371385Sbinkertn@umich.edudef nfspath(dir):
381385Sbinkertn@umich.edu    if dir.startswith('/.automount/'):
391385Sbinkertn@umich.edu        dir = '/n/%s' % dir[12:]
401385Sbinkertn@umich.edu    elif not dir.startswith('/n/'):
411385Sbinkertn@umich.edu        dir = '/n/%s%s' % (socket.gethostname().split('.')[0], dir)
421385Sbinkertn@umich.edu    return dir
431385Sbinkertn@umich.edu
441816Sbinkertn@umich.edudef syncdir(srcdir, destdir):
451816Sbinkertn@umich.edu    srcdir = normpath(srcdir)
461816Sbinkertn@umich.edu    destdir = normpath(destdir)
471816Sbinkertn@umich.edu    if not isdir(destdir):
481816Sbinkertn@umich.edu        sys.exit('destination directory "%s" does not exist' % destdir)
491816Sbinkertn@umich.edu
501816Sbinkertn@umich.edu    for root, dirs, files in os.walk(srcdir):
511816Sbinkertn@umich.edu        root = normpath(root)
521816Sbinkertn@umich.edu        prefix = os.path.commonprefix([root, srcdir])
531816Sbinkertn@umich.edu        root = root[len(prefix):]
541816Sbinkertn@umich.edu        if root.startswith('/'):
551816Sbinkertn@umich.edu            root = root[1:]
561816Sbinkertn@umich.edu        for rem in [ d for d in dirs if d.startswith('.') or d == 'SCCS']:
571816Sbinkertn@umich.edu            dirs.remove(rem)
581816Sbinkertn@umich.edu
591816Sbinkertn@umich.edu        for entry in dirs:
601816Sbinkertn@umich.edu            newdir = joinpath(destdir, root, entry)
611816Sbinkertn@umich.edu            if not isdir(newdir):
621816Sbinkertn@umich.edu                os.mkdir(newdir)
631816Sbinkertn@umich.edu                print 'mkdir', newdir
641816Sbinkertn@umich.edu
651816Sbinkertn@umich.edu        for i,d in enumerate(dirs):
661816Sbinkertn@umich.edu            if islink(joinpath(srcdir, root, d)):
671816Sbinkertn@umich.edu                dirs[i] = joinpath(d, '.')
681816Sbinkertn@umich.edu
691816Sbinkertn@umich.edu        for entry in files:
701816Sbinkertn@umich.edu            dest = normpath(joinpath(destdir, root, entry))
711816Sbinkertn@umich.edu            src = normpath(joinpath(srcdir, root, entry))
721816Sbinkertn@umich.edu            if not isfile(dest) or not filecmp(src, dest):
731816Sbinkertn@umich.edu                print 'copy %s %s' % (dest, src)
741816Sbinkertn@umich.edu                copy(src, dest)
751816Sbinkertn@umich.edu
761385Sbinkertn@umich.eduprogpath = nfspath(sys.path[0])
771376Sbinkertn@umich.eduprogname = basename(sys.argv[0])
781376Sbinkertn@umich.eduusage = """\
791376Sbinkertn@umich.eduUsage:
801602Sbinkertn@umich.edu    %(progname)s [-c] [-e] [-f] [-j <jobfile>] [-q queue] [-v] <regexp>
811376Sbinkertn@umich.edu    -c           clean directory if job can be run
821376Sbinkertn@umich.edu    -e           only echo pbs command info, don't actually send the job
831376Sbinkertn@umich.edu    -f           force the job to run regardless of state
841376Sbinkertn@umich.edu    -q <queue>   submit job to the named queue
851602Sbinkertn@umich.edu    -j <jobfile> specify the jobfile (default is <basedir>/test.py)
861376Sbinkertn@umich.edu    -v           be verbose
871376Sbinkertn@umich.edu
881602Sbinkertn@umich.edu    %(progname)s [-j <jobfile>] -l [-v] <regexp>
891602Sbinkertn@umich.edu    -j <jobfile> specify the jobfile (default is <basedir>/test.py)
901376Sbinkertn@umich.edu    -l           list job names, don't submit
911376Sbinkertn@umich.edu    -v           be verbose (list job parameters)
921376Sbinkertn@umich.edu
931376Sbinkertn@umich.edu    %(progname)s -h
941376Sbinkertn@umich.edu    -h           display this help
951376Sbinkertn@umich.edu""" % locals()
961376Sbinkertn@umich.edu
971376Sbinkertn@umich.edutry:
981376Sbinkertn@umich.edu    import getopt
991602Sbinkertn@umich.edu    opts, args = getopt.getopt(sys.argv[1:], '-cd:efhj:lq:v')
1001376Sbinkertn@umich.eduexcept getopt.GetoptError:
1011376Sbinkertn@umich.edu    sys.exit(usage)
1021376Sbinkertn@umich.edu
1031376Sbinkertn@umich.educlean = False
1041376Sbinkertn@umich.eduonlyecho = False
1051376Sbinkertn@umich.eduexprs = []
1061376Sbinkertn@umich.eduforce = False
1071376Sbinkertn@umich.edulistonly = False
1081376Sbinkertn@umich.eduqueue = ''
1091376Sbinkertn@umich.eduverbose = False
1101385Sbinkertn@umich.edurootdir = nfspath(os.getcwd())
1111602Sbinkertn@umich.edujfile = 'test.py'
1121381Sbinkertn@umich.edufor opt,arg in opts:
1131381Sbinkertn@umich.edu    if opt == '-c':
1141376Sbinkertn@umich.edu        clean = True
1151381Sbinkertn@umich.edu    if opt == '-d':
1161381Sbinkertn@umich.edu        rootdir = arg
1171381Sbinkertn@umich.edu    if opt == '-e':
1181376Sbinkertn@umich.edu        onlyecho = True
1191381Sbinkertn@umich.edu    if opt == '-f':
1201376Sbinkertn@umich.edu        force = True
1211381Sbinkertn@umich.edu    if opt == '-h':
1221376Sbinkertn@umich.edu        print usage
1231376Sbinkertn@umich.edu        sys.exit(0)
1241602Sbinkertn@umich.edu    if opt == '-j':
1251602Sbinkertn@umich.edu        jfile = arg
1261381Sbinkertn@umich.edu    if opt == '-l':
1271376Sbinkertn@umich.edu        listonly = True
1281381Sbinkertn@umich.edu    if opt == '-q':
1291381Sbinkertn@umich.edu        queue = arg
1301381Sbinkertn@umich.edu    if opt == '-v':
1311376Sbinkertn@umich.edu        verbose = True
1321376Sbinkertn@umich.edu
1331381Sbinkertn@umich.edubasedir = joinpath(rootdir, 'Base')
1341381Sbinkertn@umich.edulinkdir = joinpath(rootdir, 'Link')
1351381Sbinkertn@umich.edu
1361376Sbinkertn@umich.edufor arg in args:
1371376Sbinkertn@umich.edu    exprs.append(re.compile(arg))
1381376Sbinkertn@umich.edu
1391381Sbinkertn@umich.eduif not listonly and not onlyecho and isdir(linkdir):
1401385Sbinkertn@umich.edu    if verbose:
1411385Sbinkertn@umich.edu        print 'Checking for outdated files in Link directory'
1421816Sbinkertn@umich.edu    syncdir(linkdir, basedir)
1431376Sbinkertn@umich.edu
1441376Sbinkertn@umich.eduimport job, jobfile, pbs
1451376Sbinkertn@umich.edu
1461602Sbinkertn@umich.edutest = jobfile.JobFile(joinpath(basedir, jfile))
1471376Sbinkertn@umich.edu
1481376Sbinkertn@umich.edujoblist = []
1491376Sbinkertn@umich.edufor jobname in test.jobs:
1501376Sbinkertn@umich.edu    if not exprs:
1511376Sbinkertn@umich.edu        joblist.append(jobname)
1521376Sbinkertn@umich.edu        continue
1531376Sbinkertn@umich.edu
1541376Sbinkertn@umich.edu    for expr in exprs:
1551376Sbinkertn@umich.edu        if expr.match(jobname):
1561376Sbinkertn@umich.edu            joblist.append(jobname)
1571376Sbinkertn@umich.edu            break
1581376Sbinkertn@umich.edu
1591376Sbinkertn@umich.eduif listonly:
1601376Sbinkertn@umich.edu    if verbose:
1611376Sbinkertn@umich.edu        for jobname in joblist:
1621376Sbinkertn@umich.edu            test.printinfo(jobname)
1631376Sbinkertn@umich.edu    else:
1641376Sbinkertn@umich.edu        for jobname in joblist:
1651376Sbinkertn@umich.edu            print jobname
1661376Sbinkertn@umich.edu    sys.exit(0)
1671376Sbinkertn@umich.edu
1681376Sbinkertn@umich.eduif not onlyecho:
1691376Sbinkertn@umich.edu    jl = []
1701376Sbinkertn@umich.edu    for jobname in joblist:
1711383Sbinkertn@umich.edu        jobdir = joinpath(rootdir, jobname)
1721376Sbinkertn@umich.edu        if os.path.exists(jobname):
1731376Sbinkertn@umich.edu            if not force:
1741383Sbinkertn@umich.edu                if os.path.isfile(joinpath(jobdir, '.success')):
1751376Sbinkertn@umich.edu                    continue
1761376Sbinkertn@umich.edu
1771383Sbinkertn@umich.edu                if os.path.isfile(joinpath(jobdir, '.start')) and \
1781383Sbinkertn@umich.edu                       not os.path.isfile(joinpath(jobdir, '.stop')):
1791376Sbinkertn@umich.edu                    continue
1801376Sbinkertn@umich.edu
1811376Sbinkertn@umich.edu            if not clean:
1821376Sbinkertn@umich.edu                sys.exit('job directory not clean!')
1831376Sbinkertn@umich.edu
1841383Sbinkertn@umich.edu            job.cleandir(jobdir)
1851376Sbinkertn@umich.edu        else:
1861383Sbinkertn@umich.edu            os.mkdir(jobdir)
1871393Sbinkertn@umich.edu        jl.append(jobname)
1881376Sbinkertn@umich.edu    joblist = jl
1891376Sbinkertn@umich.edu
1901816Sbinkertn@umich.edudef setname(jobid, jobname):
1911816Sbinkertn@umich.edu    # since pbs can handle jobnames of 15 characters or less, don't
1921816Sbinkertn@umich.edu    # use the raj hack.
1931816Sbinkertn@umich.edu    if len(jobname) <= 15:
1941816Sbinkertn@umich.edu        return
1951816Sbinkertn@umich.edu
1961816Sbinkertn@umich.edu    import socket
1971816Sbinkertn@umich.edu    s = socket.socket()
1981816Sbinkertn@umich.edu    # Connect to pbs.pool and send the jobid/jobname pair to port
1991816Sbinkertn@umich.edu    # 24465 (Raj didn't realize that there are only 64k ports and
2001816Sbinkertn@umich.edu    # setup inetd to point to port 90001)
2011816Sbinkertn@umich.edu    s.connect(("pbs.pool", 24465))
2021816Sbinkertn@umich.edu    s.send("%s %s\n" % (jobid, jobname))
2031816Sbinkertn@umich.edu    s.close()
2041816Sbinkertn@umich.edu
2051376Sbinkertn@umich.edufor jobname in joblist:
2061376Sbinkertn@umich.edu    jobdir = joinpath(rootdir, jobname)
2071376Sbinkertn@umich.edu
2081376Sbinkertn@umich.edu    if not onlyecho and not os.path.isdir(jobdir):
2091376Sbinkertn@umich.edu        sys.exit('%s is not a directory.  Cannot build job' % jobdir)
2101376Sbinkertn@umich.edu
2111385Sbinkertn@umich.edu    print 'Job name:       %s' % jobname
2121385Sbinkertn@umich.edu    print 'Job directory:  %s' % jobdir
2131376Sbinkertn@umich.edu
2141376Sbinkertn@umich.edu    qsub = pbs.qsub()
2151376Sbinkertn@umich.edu    qsub.pbshost = 'simpool.eecs.umich.edu'
2161376Sbinkertn@umich.edu    qsub.stdout = joinpath(jobdir, 'jobout')
2171816Sbinkertn@umich.edu    qsub.name = jobname[:15]
2181376Sbinkertn@umich.edu    qsub.join = True
2191376Sbinkertn@umich.edu    qsub.node_type = 'FAST'
2201376Sbinkertn@umich.edu    qsub.env['ROOTDIR'] = rootdir
2211816Sbinkertn@umich.edu    qsub.env['JOBNAME'] = jobname
2221376Sbinkertn@umich.edu    if len(queue):
2231376Sbinkertn@umich.edu        qsub.queue = queue
2241385Sbinkertn@umich.edu    qsub.build(joinpath(progpath, 'job.py'))
2251376Sbinkertn@umich.edu
2261385Sbinkertn@umich.edu    if verbose:
2271385Sbinkertn@umich.edu        print 'PBS Command:    %s' % qsub.command
2281385Sbinkertn@umich.edu
2291385Sbinkertn@umich.edu    if not onlyecho:
2301385Sbinkertn@umich.edu        ec = qsub.do()
2311385Sbinkertn@umich.edu        if ec == 0:
2321816Sbinkertn@umich.edu            jobid = qsub.result
2331816Sbinkertn@umich.edu            print 'PBS Jobid:      %s' % jobid
2341816Sbinkertn@umich.edu            setname(jobid, jobname)
2351385Sbinkertn@umich.edu        else:
2361385Sbinkertn@umich.edu            print 'PBS Failed'
237